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PubMed: 3684584    PubMedCentral: PMC306430

Nucleotide sequence of the murine TNF locus, including the TNF-alpha (tumor necrosis factor) and TNF-beta (lymphotoxin) genes.

Semon D, Kawashima E, Jongeneel CV, Shakhov AN, Nedospasov SA
Nucleic acids research, 9083 , 1987

Abstract:

Organism/Genes in external databases

Datasource Data
Annotations in NCBI Entrez Genes
EntrezGene:16992/Lta
EntrezGene:21926/Tnf
Genes found in fulltext (GNAT)
EntrezGene:16992/Lta
EntrezGene:21926/Tnf

Best predicted genome from sequences: Mus musculus

Best predicted genes based on DNA sequences found in paper:

Symbol Ensembl Sequences
Lta ENSMUSG00000024402 8,10,13,14,15,16
Tnf ENSMUSG00000024401 20,29,30,31,32,33,34

Genome Annotation: Links to best and chained genome matches

SeqNo Coordinate Range
0, 2, 3, 4, 5, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 19, 20, 21, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 35, 36, 37 chr17:35336102-35343320

Recognized sequences in fulltext

SeqNo file name Recognized DNA
0 PMC306430.txt GAATTCTGAAGCTCCCTCTGTACAGAGCATTGGAAGCCTGGGGTGTACATTTGGGGTTACATGATCTTGGGTTCTAGAGAATACCCCCAAATCATCTTCCAGACCTGGCATTCTAGGACAGGGTTCTCAACCTTCCTAACTCCATGACCCTTTAATACAGTTCCTCATGTTGTGTGACCCCAACCATACTTATTTTCGTTGCTATTTCATAACTGTAATTTCGCTGCTATTATGAATCATAATGTATATTTGTTTTAAATAGAGGTTTCCAGGGACCTTGCCCACAGGTTGAGAACTCCCTCCAGAGAGTAAGGACACAGTTAAGATTGTTACACACCAGGATGCCCCAGATTTGAGAGCACTGTTGGAACTTCTTG
1 PMC306430.txt ACATGACTGGCAGATGAACTGGCAGAAAAATGGGCAGTGGTGCACACACCTTTTCCCAGCACTTGGGAGGCAGAGGGCGGATTTCTGAGTTCTAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGACACCAGGCTACACAGAGAAACCCTGTCTA
2 PMC306430.txt CTGCAGATGACCAGAAAATACAGATATATTGGATAACTGTGACTTAGCCTGAAGGGC
3 PMC306430.txt CATCCAGAGCCCTGGGTTCGAACCTGAAAACAATGCCGCTAACCACATGTGCTTCGAGCCTCCAGACATGACCATGATCGACAGAGAGGAATGTGCAGAGAACCTGTGACAGTCAAGGGTGCAGAAGTGATATAAACCATCACTCTTCAGGGAACCAGGCTTCCAGTCACAGCCCATGCACCCTCTCCACGTTGCTCGGCCGTTCACTGAACTCCTGCCTGACCCAGCTCCCTGCTAGTCCCTGCGCCCACAGTTCCCCGGACCCGACTCCCTTTCCCAGAACCAGTAGTCTAAGCCCTTAGCCTGCGTTCTCTCCTAGCCCCAGCCTTTCCTGCCTTCGACTGACAGCACATCTTCTA
4 PMC306430.txt TTCCCCAAGCCCCCCCCGACCTAGCCCGCCCGCTGCCTGCCACACTGCCCTTCCTCTATAAAGGGACCCGAGCGCCAGCGCCCAGACCCCGCACAGCAGGTGAGCCTCTCCTACCCTGTCTCCTTGGGCTTACCCTGGTATCAGGATCCCTCAGGATCCTACCTCCTTTCTTGAGCCACAG
5 PMC306430.txt CCTTTTCTATACAACCTGCCT
6 PMC306430.txt GGTCTGGTCCTCCTGTCGTGCTTTGATTTTTGTCTGTTCCTGTGGCCCTTATCAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTGCCTCTGTTACCATTGTCTGATTCTATGT
7 PMC306430.txt CCTCTGTCTCTCCTTATCCTCTCACTTCAGGTTCCCCTGCCTGTCCCCTTTTCTGTCTGTCCCCTGTCTCTCAGGGTGCTGTCTCACTGGGAGTGGTCTGTCTTCCGCTGTGTGCCCCCCTCCGCTACACACACACACTCTCTCTCTCTCT
8 PMC306430.txt CTCAGCAGTTCTCCACATGACACTGCTCGCCGTCTCCACCTCTTGAGGTGCTTGGCACCCCTCCTGTCTTCCTCCTGGGCTGCTGCTGGCCCTGCC
9 PMC306430.txt TCTAGCCAGGTGAGCAGCAAGAGTTGGTGCTGGTGGCCTAGCTACTCAGAGTCCTAGAGTCCTCTCCACTCTCTTCTGTCCCAGGGAC
10 PMC306430.txt TCTCTTGTCCGCTTCTCCCTGCCAGACAGCCCATCCACTCCCTCAGAAGCACTTGACCCATGGCATCCTGAACCTGCTGCTCACCTTGTTGTA
11 PMC306430.txt ACTTCTGCTCCAGAGGAGAGGTCCAGTCCCTGCCTTTTGTCCTACTTGCCCAGGCTCAGGCGATCTTCCCATCTCCCCACACCAACTTTTCTTACCCCTAAGGCAGGCACCCCACTCCCATCTCCCTACCAACCATCCCACTTGTCCATGCCTCTCCTCAGGATGGGGACCTCTGATCTTGATAGCCCCCAA
12 PMC306430.txt TGTCTTGTGCCTCTTCCCAGGGTACCCCAGCAAGCAGAACTCACTCTCTGGAGAGCAAGCACGGATCGTGCCTTTCTCCGACATGCTTCTCTTTGAGC
13 PMC306430.txt CTCCCTCCTGATCCCCACCAGTCCTCTACTTTGTCTACTCCCATGTTTTCTCTGGAGAAAGCTGCTCCCCCAGGGCCATTCCCACTCCCA
14 PMC306430.txt TCTACCTGGCACACGAGGTCCAGCTCTTTTCCTCCCAATACCCCTTCCATGTGCCTCTCCTCAGTGCCAGGTCTGTGTATCCGGACTTCAAGGACC
15 PMC306430.txt GTGGGTGCGCTCAATGTACCAGGGGGCTGTGTTCCTGCCAGTAAGGGAGACCAGCTGTCCACCCACACCGACGGCATCTCCCATCTACACTTCAGCCCC
16 PMC306430.txt AGCATGTATTCTTTGGAGCCTTTGCACTGTAGATTCTAAGAACCCAAGATTGGATTCCAGCCTCCATCCTGACCGTTGTTTCAAGTCACATCC
17 PMC306430.txt CCACAGTCTCCAGCCTTCCCCACTAAAATAACCTGGAGCTCTCACGGGAGTCTGAGACACTTCAGGGGACTACATCTTCCCCAGGCAGGGGACGACTCAAGCCTACCTAGAAGTTCCTGCACAGAGCAGGGTTTTTGTGGGTCTAGGTCGGACAGAGACCTGGACATGAATCAGATGACAACTAGGTCCCAGACACAAAGGTGTCTACCTCAGACAGACCCATCTAAGAGAGAGATGGCGAGAGTTAGATGTTCTAGAAGAGCACGAAGCTCTAAAGCCAGCCACTGCTTGGCTAGACATCCACAGGGACCCCCTGCACCATCTGTGAACCCTCTGAGATTCTGTCTGCTTGTGTCTGTCTTGCGTTGGGGGAAACTTCCTGGTCTCTTTAAGGAGTGGAGCAGGGGACAGAGGCGATCCGGGCAGAGCAAAGAGACATGAGGAGCAGGCAGCTCCCAGAGACATGGTGGATTCACGGGAGTGAGGCAGCTTAACTGCCTGAGCTAGGGAGATCCATCCGGGTGGAGAGAGATGAGGGTCGGGGAGAAGTGACTCCACTGGAGGGTGGGAGAGTGTTTACGGAGGGGAATCCTTGGAAGACCGGGGAGTCATACGGATTGGGAGAAATCCTGGAAGCAGGGCTGTGGGACCTAAATGTCTGAGTAGATATGGCAGAGGCTCCGTGGAAAACTCACTTGGGAGCAGGGACCCAAAGCAGCAGCCTGAGCTCATGATCAGAGTGAGGACCGTGAATTCCCAGGGCTGAGTTCATTCCCTCTGGGGCTGCCCCATACTCATCCCATTACCCCCCCCACCAGCCCTCCCAAAGCCCCTCTCAAGCTGCTCTGCCTTCAGCCACTTCCTCCAAGAACTCAAACAGGGGGCTTTCCCTCCTCAATATCATGTCTCCCCCCTTGAAGCACCCCCCAATGGCTAAGTTCTCCCCCATGGATGTCCCATTTAGAAATCAAAAGGAAATAGACACAGGCATGGTCTTTCTGATTAGCTCTGGAGGACAGAGAAGAAAGTGGGTTTCAGTTCTCAGGGTCCTATACACAAAAAAAAAAAAAAAAAAAACCTCCTGACAGATCCTGGGTGGGGGACGACGGGGGAGGAGATTCCTTGATGCCTGGGTTCCCACTTTCCCAACCTTGCCCGCGATGGAGAGAGGCCACTCCAGATGCTAGGAGGGACAGACATG
18 PMC306430.txt GTGGGTGACCAAGGGCAATAAACCTCTTTTCCCTCAGTTGGTCCATGCGAGAGACCCAAAGGAGGAGTGGGAGGGTGGGTGATGTACCGCAGTCAGAAGGCTTGTGAGGTCCATGCACACTTCCCAAATGCACCCAGCTTTCAACAAAGAACAGACAATTTGGCCCAGATTGCCAACCGAGCAGGTTAGGGCACCTTCTCAATGAGATACTGGTTTATCTCCCACAGGAGTTTCCGAGGTTGATGAGAGCTTTCCCGCCCTCTTCCCAGGGCTATAGCGGCCGTCTGCA
19 PMC306430.txt CAGCCAGCCAGCAGAAGCTCCCTCAGCGAGGACAGCAAGGGACTAGCCAGGAGGGAGAACAGAAACTCCAGCATCCTGGAAATAGCTCCCAGAAGCAAGCAGCCAACCAGGCAGGTTCTGTCCCTTTCACTCACTGGCCCAAGGCGCCACATCTCCCTCCAGAAAAGACACCATGAGCACAGAAAGCATGATCCGC
20 PMC306430.txt GACGTGGAACTGGCAGAAGAGGCACTCCCCCAAGATGGGGGGCTTCCAGAACTCCAGGCGGTGCCTATGTCTCAGCCTCTTCTCATTCCTGCTGTGG
21 PMC306430.txt CAGGGGCCACCACGCTCTTCTGTCTACTGAACTTCGGGGTGATCGGTCCCCAAAGGGATGAGGTGAGTGTCTGGGCAACCCTTATTCTCGCTCACAAGCAGATT
22 PMC306430.txt AAACGGGTTAGGAGGGCAAGAAGGACAGTGTGAGGGAAAGAAGTGGGCAGCAAGCGGGCAAGGTGGAGGAGAGTGTGGAGGGGACAGAGTAGGACCTCGGACCCATGCGTCCAGCTGACTAAACATCCTTCGTCGGATGCACAGAGAGATGAATGAACGAACAAGTGTGTTCACACGTGGAGAGATCTGGAAAGATGTGGCCAGGGGAAGAGGGGATAAGCAAGAGATAAACTCAGAGACAGAAATGAGAGAGGCATGAGAGATAAGGAGGAAGATGAAGGGGAGATAACGGGAGATCAAGCACAGAGGGCACCGCAGAAAGAAGCCGTGGGTTGGACAGATGATGAATGAAGAAGAAAACACAAAGTGGGGGTGGGTGGGGCAGAGGAAC
23 PMC306430.txt GTAAGCGGGGGCCAGCCGGGAGCTTCTCCTTTGGGGTGAGTCTGTCTTAACTAACCTCCTTTTCCTACACAGAAGTTCCCAAATGGCCTCCCTCTCAT
24 PMC306430.txt CAGTTCTATGCCCAGACCCTCACACTCAGTAAGTGTTCCCACACCTCTCTCTTAATTTAAGATGGAGAAGGGCAGTTAGGCATGGGATGAGATGGGGTG
25 PMC306430.txt GGGGGAACTTAAGCTTTGGTTTGGGAGGAAGGGGTCTAAGTGCATAGATGCTTGCTGGGAAGCCTAGGACCATCCTTGCCTTTGTCTCTTCCC
26 PMC306430.txt CGTCCAGGATCATCGTTCTCAATTCGAGTGACAGCCTGTAGCCCACGTCGTAGGTAAGATTTCTTTACATGTGCCTTGAGATGAGGGGCATGATT
27 PMC306430.txt GGGGGGCGGGTTGAGGGGTGTCGAGCCAGGCTGAGAAAGACAGAGCTCTTAGAGACAGCACGTGAGAGTCAGAGCAGTGACTCAAAGCAAGGCATCAGGGGGCCACCCGGGACCTCATAGCCAATGGGATGTGGAAAGACAGAGGGTGCAGGACCGGAAGTGAAGTGTGGGTAGCTGCTGAGGCTCAGGATGTGGAG
28 PMC306430.txt TGTGAACTAAGAGGGTGACACTGACTCAATCCTCCCCCCCCCCC
29 PMC306430.txt CACCAAGTGGAGGAGCAGCTGGAGTGGCTGAGCCAGCGCGCCAACGC
30 PMC306430.txt CCTCCTGGCCAACGGCATGGATCTCAAAGACAACCCTAGTGGTGCCAGCCGATGGGTTGTACCTTGTCTACTCCCAGGTTCTCTTCAAGGGACGGC
31 PMC306430.txt TGCCCCGACTACGTGCTCCTCACCCACACCGCAGCCGATTTGCTATCTCATACCAGGAGAAAGCAACCTCCTCTCTGCCGTCGAGCCCCTGCCCCAC
32 PMC306430.txt AGGACACCCCTGAGGGGGCTGAGCTCAAACCCTGGTATGAGCCCATATACCTGGGAGGAGTCTTCCAGCTGGAGAAGGGGGACCAACTCAGCGCTGAGGT
33 PMC306430.txt CAATCTGCCCAAGTACTTAGACTTTGCGGAGTCCGGGCAGGTCTACTTTGGAGTCATTGCTCTGTGAAGGGAATGGGTGTTCATCCATTCTCTACCCAGC
34 PMC306430.txt CCCCACTCTGACCCCTTTACTCTGACCCCTTTATTGTCTACTCCTCAGAGCCCCCAGTCTGTGTCCTTCTAACTTAGAAAGGGGATTATGGCTCAGAGTCCAACTCTGTGCTCAGAGCTTTCAACAACTACTCAGAAACACAAGATGCTGGGACAGTGACCTGGACTGTGGGCCTCTCATGCACCACCATCAAGGACTCAAATGGGCTTTCCGAATTCACTGGAGCCTCGAATGTCCATTCCTGAGTTCTGCAAGGGAGTGGTCAGGTTGCCTCTGTCTCAGATGAGGCTGGATAGATCTCAGGCCTTCCTACCTTCAGACCTTTCCAGACTCTTCCCTGAGGTGCAATGCACAGCCTTCCTCACAGAGCCAGCCCCCCTCTATTTATATTTGCACTTATTATTTATTATTTATTTATTATTTATTTATTTGCTTATGAATGTATTTATTTGGAAGGCCGGGGTGTCCTGGAGGACCCAGTGTGGGAGCTGTCTTCAGACAGACATGTTTTCTGTGAAACGGAGCTGAGCTGTCCCCACCTGGCCTCTCTACCTTGTTGCCTCCTCTTTTGCTTATGTTTAAAACAAATATTATCTAACCCAATTGTCTTAAACGCTGATTTGGTGACCAGGCTGTCGCTACATCACTGAACCTCTGCTCCCCACGGGAGCCGTGACTGTAATTGCCCT
35 PMC306430.txt ACAGTCAATTGAGAGAAATAAAGATCGCTTGGAAAAGAAATGTGATTTCTGTCTTGGGATGAAGTCTGCATCCATCTCTTTGCGGAGGCCTAAAGTCTCT
36 PMC306430.txt GGGTCCAGATCTCAGTCTTTATACCCCTGGGCCATTGACCCCCAGACCCCCGTGGACAGGCAGCCCATCCCTACCTCTCCCCCGGAACAG
37 PMC306430.txt GAGCCTAACCCTAATTACCTTTGCCCTGGGGCATGGGAATTTCCCACTCTGGGATTC
Display recognized sequences in FASTA format