Presentations

Annotating genes and genomes with DNA sequences extracted from the biomedical literature. 10th CSHL/WT Conference on Genome Informatics, Hinxton, UK, 15-19 Sep 2010.

pubmed2ensembl: Linking Publications and Genes. 10th CSHL/WT Conference on Genome Informatics, Hinxton, UK, 15-19 Sep 2010.

Gene mention normalization using GNAT and LINNAEUS. BioCreative III Workshop, Bethesda, MD, USA, 13-15 Sep 2010.

Linking gene expression mentions to anatomical locations. Association for Computational Linguistics 2010 Workshop on Biomedical Natural Language Processing, Uppsala, SE, 15 Jul 2010.

Promoter targeting preferences of the D. melanogaster P-element. 51st Annual Drosophila Research Conference, Washington, DC, USA, 7-11 Apr 2010.

Population genomics of Drosophila transposable elements. Next-Generation Sequencing: New Chances and Challenges for Evolutionary Genetics Workshop, Munich, DE, 10-12 March 2010

An age-of-allele test of neutrality for transposable element insertions 43rd Population Genetic Group Meeting, Liverpool, UK, 5-8 Jan 2010.

Population and comparative genomics of Drosophila transposable elements. Royal Entomological Society Meeting, Sheffield, UK, 15-17 July 2009

Testing the palindromic target site model for DNA transposon insertion using the Drosophila melanogaster P-element. 50th Annual Drosophila Research Conference, Chicago, USA, 4-8 Mar 2009.

Computational analysis of transposable element evolution in Drosophila genomes. University of Liverpool, Liverpool, UK, Dec 2008.

Computational analysis of transposable element evolution in Drosophila genomes. XX International Congress of Genetics, Berlin, DE, Jul 2008.

The role of energetic costs in yeast gene expression. Society for Molecular Biology of Evolution, Barcelona, ES, Jul 2008.

Inferring functional constraints on noncoding DNA from patterns of sequence evolution. University of Bath, Bath, UK and Queen Mary University of London, London, UK, 30-31 Oct 2007.

The RegCreative Jamboree: an experiment in text-mining assisted community annotation. 2nd BioCreAtIvE Workshop, Madrid, Spain, 25 Apr 2007.

Inferring functional constraints on noncoding DNA from patterns of sequence evolution. 5th Regulation and Variability of Animal Genome Expression (R.I.V.A.G.E.) Day, Jouy en Josas, France, 25 Jan 2007.

LTR retrotransposons are systematically younger than non-LTR retrotransposons in the Drosophila melanogaster genome. 40th Population Genetic Group Meeting, Manchester, UK, 11 Jan 2007.

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